Protein–RNA interactions for Protein: P08425

MSF1, Phenylalanine--tRNA ligase, mitochondrial, yeastyeast

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSF1P08425 GLN4YOR168W 2430 nt4.23□□□□□ -1.73
MSF1P08425 TFB3YDR460W 966 nt4.23□□□□□ -1.73
MSF1P08425 SUP56tL(CAA)A 82 nt4.23□□□□□ -1.73
MSF1P08425 SUP53tL(CAA)C 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)DtL(CAA)D 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)G1tL(CAA)G1 82 nt4.23□□□□□ -1.73
MSF1P08425 SUP54tL(CAA)G2 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)G3tL(CAA)G3 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)KtL(CAA)K 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)LtL(CAA)L 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)MtL(CAA)M 82 nt4.23□□□□□ -1.73
MSF1P08425 tL(CAA)NtL(CAA)N 82 nt4.23□□□□□ -1.73
MSF1P08425 NPY1YGL067W 1155 nt4.23□□□□□ -1.73
MSF1P08425 NAT2YGR147C 867 nt4.23□□□□□ -1.73
MSF1P08425 CDC12YHR107C 1224 nt4.23□□□□□ -1.73
MSF1P08425 TVP38YKR088C 1014 nt4.23□□□□□ -1.73
MSF1P08425 IMP2YMR035W 534 nt4.23□□□□□ -1.73
MSF1P08425 NCE102YPR149W 522 nt4.23□□□□□ -1.73
MSF1P08425 MNN4YKL201C 3537 nt4.23□□□□□ -1.73
MSF1P08425 GIP4YAL031C 2283 nt4.23□□□□□ -1.73
MSF1P08425 IMA3YIL172C 1770 nt4.22□□□□□ -1.73
MSF1P08425 IMA4YJL221C 1770 nt4.22□□□□□ -1.73
MSF1P08425 FMP30YPL103C 1407 nt4.22□□□□□ -1.73
MSF1P08425 OCT1YKL134C 2319 nt4.22□□□□□ -1.73
MSF1P08425 RNA15YGL044C 891 nt4.22□□□□□ -1.73
MSF1P08425 RSA3YLR221C 663 nt4.22□□□□□ -1.73
MSF1P08425 VPS68YOL129W 555 nt4.22□□□□□ -1.73
MSF1P08425 RET3YPL010W 570 nt4.22□□□□□ -1.73
MSF1P08425 SET6YPL165C 1122 nt4.22□□□□□ -1.73
MSF1P08425 SSA2YLL024C 1920 nt4.22□□□□□ -1.73
MSF1P08425 BDP1YNL039W 1785 nt4.22□□□□□ -1.73
MSF1P08425 FLC1YPL221W 2382 nt4.21□□□□□ -1.73
MSF1P08425 NUP42YDR192C 1293 nt4.21□□□□□ -1.74
MSF1P08425 BUD16YEL029C 939 nt4.21□□□□□ -1.74
MSF1P08425 SAE3YHR079C-A 276 nt4.21□□□□□ -1.74
MSF1P08425 YMR315WYMR315W 1050 nt4.21□□□□□ -1.74
MSF1P08425 YOR289WYOR289W 756 nt4.21□□□□□ -1.74
MSF1P08425 YPL014WYPL014W 1146 nt4.21□□□□□ -1.74
MSF1P08425 YPR059CYPR059C 387 nt4.21□□□□□ -1.74
MSF1P08425 NTA1YJR062C 1374 nt4.21□□□□□ -1.74
MSF1P08425 THI20YOL055C 1656 nt4.21□□□□□ -1.74
MSF1P08425 TAF12YDR145W 1620 nt4.21□□□□□ -1.74
MSF1P08425 RGP1YDR137W 1992 nt4.2□□□□□ -1.74
MSF1P08425 DAS2YDR020C 699 nt4.2□□□□□ -1.74
MSF1P08425 YDR246W-AYDR246W-A 201 nt4.2□□□□□ -1.74
MSF1P08425 SPC42YKL042W 1092 nt4.2□□□□□ -1.74
MSF1P08425 CDC21YOR074C 915 nt4.2□□□□□ -1.74
MSF1P08425 MSK1YNL073W 1731 nt4.2□□□□□ -1.74
MSF1P08425 VHC1YBR235W 3363 nt4.19□□□□□ -1.74
MSF1P08425 KRE29YER038C 1395 nt4.19□□□□□ -1.74
MSF1P08425 PER1YCR044C 1074 nt4.19□□□□□ -1.74
MSF1P08425 RCR2YDR003W 633 nt4.19□□□□□ -1.74
MSF1P08425 LOH1YJL038C 660 nt4.19□□□□□ -1.74
MSF1P08425 NAT3YPR131C 588 nt4.19□□□□□ -1.74
MSF1P08425 HST1YOL068C 1512 nt4.19□□□□□ -1.74
MSF1P08425 MET4YNL103W 2019 nt4.19□□□□□ -1.74
MSF1P08425 MET17YLR303W 1335 nt4.19□□□□□ -1.74
MSF1P08425 BRE4YDL231C 3378 nt4.19□□□□□ -1.74
MSF1P08425 YDR444WYDR444W 2064 nt4.18□□□□□ -1.74
MSF1P08425 YDR132CYDR132C 1488 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)CtK(CUU)C 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)D1tK(CUU)D1 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)D2tK(CUU)D2 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)E1tK(CUU)E1 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)E2tK(CUU)E2 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)FtK(CUU)F 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)G1tK(CUU)G1 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)G2tK(CUU)G2 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)G3tK(CUU)G3 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)ItK(CUU)I 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)JtK(CUU)J 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)KtK(CUU)K 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)MtK(CUU)M 73 nt4.18□□□□□ -1.74
MSF1P08425 tK(CUU)PtK(CUU)P 73 nt4.18□□□□□ -1.74
MSF1P08425 BUD13YGL174W 801 nt4.18□□□□□ -1.74
MSF1P08425 SRB5YGR104C 924 nt4.18□□□□□ -1.74
MSF1P08425 GPP1YIL053W 753 nt4.18□□□□□ -1.74
MSF1P08425 YJR038CYJR038C 363 nt4.18□□□□□ -1.74
MSF1P08425 YPR174CYPR174C 666 nt4.18□□□□□ -1.74
MSF1P08425 YBR219CYBR219C 384 nt4.18□□□□□ -1.74
MSF1P08425 NUP2YLR335W 2163 nt4.18□□□□□ -1.74
MSF1P08425 PRP28YDR243C 1767 nt4.17□□□□□ -1.74
MSF1P08425 YCR085WYCR085W 354 nt4.17□□□□□ -1.74
MSF1P08425 YDR056CYDR056C 618 nt4.17□□□□□ -1.74
MSF1P08425 YER085CYER085C 522 nt4.17□□□□□ -1.74
MSF1P08425 EFB1YAL003W 621 nt4.17□□□□□ -1.74
MSF1P08425 YJR096WYJR096W 849 nt4.17□□□□□ -1.74
MSF1P08425 CPR6YLR216C 1116 nt4.17□□□□□ -1.74
MSF1P08425 YLR407WYLR407W 687 nt4.17□□□□□ -1.74
MSF1P08425 OPT2YPR194C 2634 nt4.17□□□□□ -1.74
MSF1P08425 TRM11YOL124C 1302 nt4.17□□□□□ -1.74
MSF1P08425 RIM21YNL294C 1602 nt4.17□□□□□ -1.74
MSF1P08425 RPG1YBR079C 2895 nt4.16□□□□□ -1.74
MSF1P08425 YML020WYML020W 1995 nt4.16□□□□□ -1.74
MSF1P08425 TFA1YKL028W 1449 nt4.16□□□□□ -1.74
MSF1P08425 CPR1YDR155C 489 nt4.16□□□□□ -1.74
MSF1P08425 IRC22YEL001C 678 nt4.16□□□□□ -1.74
MSF1P08425 PCL6YER059W 1263 nt4.16□□□□□ -1.74
MSF1P08425 MRM2YGL136C 963 nt4.16□□□□□ -1.74
MSF1P08425 MRPL25YGR076C 474 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms