Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 AC139530.1-201ENST00000575312 1977 ntBASIC16.98■□□□□ 0.31
TCRAP04437 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRAP04437 C11orf96-202ENST00000528572 1834 ntBASIC16.98■□□□□ 0.31
TCRAP04437 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.97■□□□□ 0.31
TCRAP04437 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TCRAP04437 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 AL592293.1-201ENST00000502889 1188 ntBASIC16.97■□□□□ 0.31
TCRAP04437 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
TCRAP04437 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TCRAP04437 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TCRAP04437 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRAP04437 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRAP04437 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TCRAP04437 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRAP04437 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TCRAP04437 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRAP04437 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TCRAP04437 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TCRAP04437 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TCRAP04437 LONRF2P2-201ENST00000439212 571 ntBASIC16.95■□□□□ 0.3
TCRAP04437 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TCRAP04437 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRAP04437 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRAP04437 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 AL137060.1-201ENST00000618151 2648 ntBASIC16.94■□□□□ 0.3
TCRAP04437 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRAP04437 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TCRAP04437 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRAP04437 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRAP04437 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRAP04437 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRAP04437 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRAP04437 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TCRAP04437 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TCRAP04437 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 AL353803.4-201ENST00000565882 1934 ntBASIC16.92■□□□□ 0.3
TCRAP04437 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
TCRAP04437 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRAP04437 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.92■□□□□ 0.3
TCRAP04437 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRAP04437 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.92■□□□□ 0.3
TCRAP04437 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TCRAP04437 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TCRAP04437 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.91■□□□□ 0.3
TCRAP04437 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.91■□□□□ 0.3
TCRAP04437 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 DUX4L9-201ENST00000449051 1259 ntBASIC16.91■□□□□ 0.3
TCRAP04437 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TCRAP04437 AL024507.2-201ENST00000606070 2574 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms