Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBL3O95164 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.94■□□□□ 0.78
UBL3O95164 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.94■□□□□ 0.78
UBL3O95164 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.94■□□□□ 0.78
UBL3O95164 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.94■□□□□ 0.78
UBL3O95164 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.94■□□□□ 0.78
UBL3O95164 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.94■□□□□ 0.78
UBL3O95164 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
UBL3O95164 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBL3O95164 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL3O95164 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
UBL3O95164 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.93■□□□□ 0.78
UBL3O95164 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.93■□□□□ 0.78
UBL3O95164 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
UBL3O95164 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 AC137767.1-201ENST00000602918 1920 ntBASIC19.93■□□□□ 0.78
UBL3O95164 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBL3O95164 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL3O95164 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL3O95164 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBL3O95164 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBL3O95164 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBL3O95164 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.92■□□□□ 0.78
UBL3O95164 AC005703.6-201ENST00000623265 1329 ntBASIC19.92■□□□□ 0.78
UBL3O95164 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL3O95164 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBL3O95164 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBL3O95164 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.91■□□□□ 0.78
UBL3O95164 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.91■□□□□ 0.78
UBL3O95164 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.91■□□□□ 0.78
UBL3O95164 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.91■□□□□ 0.78
UBL3O95164 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBL3O95164 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.9■□□□□ 0.78
UBL3O95164 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.9■□□□□ 0.78
UBL3O95164 MIR6724-1-201ENST00000616420 92 ntBASIC19.9■□□□□ 0.78
UBL3O95164 MIR6724-2-201ENST00000616483 92 ntBASIC19.9■□□□□ 0.78
UBL3O95164 MIR6724-4-201ENST00000617390 92 ntBASIC19.9■□□□□ 0.78
UBL3O95164 MIR6724-3-201ENST00000622482 92 ntBASIC19.9■□□□□ 0.78
UBL3O95164 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
UBL3O95164 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.9■□□□□ 0.78
UBL3O95164 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
UBL3O95164 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.9■□□□□ 0.78
UBL3O95164 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBL3O95164 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBL3O95164 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL3O95164 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL3O95164 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.89■□□□□ 0.77
UBL3O95164 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.89■□□□□ 0.77
UBL3O95164 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBL3O95164 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBL3O95164 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.89■□□□□ 0.77
UBL3O95164 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBL3O95164 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.89■□□□□ 0.77
UBL3O95164 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.89■□□□□ 0.77
UBL3O95164 C1orf229-201ENST00000623686 2258 ntBASIC19.89■□□□□ 0.77
UBL3O95164 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.89■□□□□ 0.77
UBL3O95164 GUSBP5-202ENST00000510805 1989 ntBASIC19.88■□□□□ 0.77
UBL3O95164 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 ANOS2P-203ENST00000472227 1816 ntBASIC19.88■□□□□ 0.77
UBL3O95164 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBL3O95164 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBL3O95164 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UBL3O95164 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBL3O95164 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
UBL3O95164 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.88■□□□□ 0.77
UBL3O95164 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBL3O95164 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms