Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.91■■■□□ 2.22
PTCD1O75127 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 AC004911.1-201ENST00000416316 871 ntBASIC28.91■■■□□ 2.22
PTCD1O75127 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCD1O75127 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
PTCD1O75127 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PTCD1O75127 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PTCD1O75127 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PTCD1O75127 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.9■■■□□ 2.22
PTCD1O75127 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.9■■■□□ 2.22
PTCD1O75127 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.9■■■□□ 2.22
PTCD1O75127 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PTCD1O75127 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
PTCD1O75127 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.89■■■□□ 2.22
PTCD1O75127 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
PTCD1O75127 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCD1O75127 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
PTCD1O75127 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCD1O75127 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
PTCD1O75127 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
PTCD1O75127 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
PTCD1O75127 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.88■■■□□ 2.21
PTCD1O75127 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.88■■■□□ 2.21
PTCD1O75127 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.88■■■□□ 2.21
PTCD1O75127 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC28.88■■■□□ 2.21
PTCD1O75127 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.88■■■□□ 2.21
PTCD1O75127 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.88■■■□□ 2.21
PTCD1O75127 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCD1O75127 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTCD1O75127 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
PTCD1O75127 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTCD1O75127 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCD1O75127 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
PTCD1O75127 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.87■■■□□ 2.21
PTCD1O75127 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.87■■■□□ 2.21
PTCD1O75127 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.87■■■□□ 2.21
PTCD1O75127 OR2I1P-207ENST00000453522 948 ntBASIC28.87■■■□□ 2.21
PTCD1O75127 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
PTCD1O75127 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 DUX4L4-201ENST00000566884 1269 ntBASIC28.87■■■□□ 2.21
PTCD1O75127 NTF6G-201ENST00000591094 616 ntBASIC28.87■■■□□ 2.21
PTCD1O75127 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PTCD1O75127 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTCD1O75127 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.86■■■□□ 2.21
PTCD1O75127 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTCD1O75127 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PTCD1O75127 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.86■■■□□ 2.21
PTCD1O75127 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
PTCD1O75127 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTCD1O75127 FP325331.1-202ENST00000623531 1380 ntBASIC28.86■■■□□ 2.21
PTCD1O75127 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.86■■■□□ 2.21
PTCD1O75127 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCD1O75127 AC138932.3-201ENST00000567634 1902 ntBASIC28.85■■■□□ 2.21
PTCD1O75127 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCD1O75127 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCD1O75127 KRT18P14-201ENST00000534205 1250 ntBASIC28.85■■■□□ 2.21
PTCD1O75127 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.85■■■□□ 2.21
PTCD1O75127 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCD1O75127 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
PTCD1O75127 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
PTCD1O75127 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
PTCD1O75127 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.84■■■□□ 2.21
PTCD1O75127 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
PTCD1O75127 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.84■■■□□ 2.21
PTCD1O75127 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.84■■■□□ 2.21
PTCD1O75127 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PTCD1O75127 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
PTCD1O75127 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
PTCD1O75127 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.84■■■□□ 2.21
PTCD1O75127 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PTCD1O75127 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCD1O75127 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.83■■■□□ 2.21
PTCD1O75127 TERF1P2-201ENST00000583350 1212 ntBASIC28.83■■■□□ 2.21
PTCD1O75127 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PTCD1O75127 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.83■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms