Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 THA1P-201ENST00000590384 1145 ntBASIC21.96■■□□□ 1.11
TRIM13O60858 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TRIM13O60858 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM13O60858 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM13O60858 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM13O60858 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.95■■□□□ 1.11
TRIM13O60858 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
TRIM13O60858 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM13O60858 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM13O60858 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM13O60858 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM13O60858 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM13O60858 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM13O60858 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TRIM13O60858 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM13O60858 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM13O60858 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM13O60858 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM13O60858 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 BHLHE23-202ENST00000612929 1109 ntBASIC21.94■■□□□ 1.1
TRIM13O60858 AC074183.2-201ENST00000623112 922 ntBASIC21.94■■□□□ 1.1
TRIM13O60858 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM13O60858 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM13O60858 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM13O60858 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM13O60858 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM13O60858 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM13O60858 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.93■■□□□ 1.1
TRIM13O60858 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TRIM13O60858 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.93■■□□□ 1.1
TRIM13O60858 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TRIM13O60858 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TRIM13O60858 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM13O60858 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
TRIM13O60858 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
TRIM13O60858 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM13O60858 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM13O60858 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM13O60858 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 NTF6A-201ENST00000591175 560 ntBASIC21.92■■□□□ 1.1
TRIM13O60858 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM13O60858 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM13O60858 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM13O60858 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM13O60858 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRIM13O60858 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM13O60858 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM13O60858 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM13O60858 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM13O60858 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM13O60858 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM13O60858 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM13O60858 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM13O60858 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM13O60858 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TRIM13O60858 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM13O60858 ABHD17AP5-201ENST00000580133 923 ntBASIC21.9■■□□□ 1.1
TRIM13O60858 PVT1_1.1-201ENST00000615125 194 ntBASIC21.9■■□□□ 1.1
TRIM13O60858 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM13O60858 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
TRIM13O60858 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM13O60858 AC139530.1-201ENST00000575312 1977 ntBASIC21.9■■□□□ 1.1
TRIM13O60858 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM13O60858 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM13O60858 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM13O60858 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM13O60858 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM13O60858 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
TRIM13O60858 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM13O60858 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TRIM13O60858 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM13O60858 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM13O60858 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM13O60858 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TRIM13O60858 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM13O60858 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
TRIM13O60858 AC092053.2-201ENST00000640557 1818 ntBASIC21.89■■□□□ 1.09
TRIM13O60858 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM13O60858 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM13O60858 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM13O60858 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIM13O60858 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM13O60858 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM13O60858 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM13O60858 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM13O60858 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
TRIM13O60858 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms