Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PLOD3O60568 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PLOD3O60568 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PLOD3O60568 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.95■□□□□ 0.94
PLOD3O60568 AC144652.1-201ENST00000609974 1624 ntBASIC20.95■□□□□ 0.94
PLOD3O60568 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PLOD3O60568 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PLOD3O60568 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PLOD3O60568 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PLOD3O60568 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PLOD3O60568 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 CLDN5-201ENST00000403084 2357 ntBASIC20.94■□□□□ 0.94
PLOD3O60568 AC009102.2-201ENST00000606772 1639 ntBASIC20.94■□□□□ 0.94
PLOD3O60568 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.94■□□□□ 0.94
PLOD3O60568 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.94■□□□□ 0.94
PLOD3O60568 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.94■□□□□ 0.94
PLOD3O60568 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PLOD3O60568 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.94■□□□□ 0.94
PLOD3O60568 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PLOD3O60568 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
PLOD3O60568 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PLOD3O60568 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.93■□□□□ 0.94
PLOD3O60568 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.93■□□□□ 0.94
PLOD3O60568 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PLOD3O60568 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PLOD3O60568 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PLOD3O60568 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.92■□□□□ 0.94
PLOD3O60568 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
PLOD3O60568 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 FP325331.1-202ENST00000623531 1380 ntBASIC20.92■□□□□ 0.94
PLOD3O60568 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.92■□□□□ 0.94
PLOD3O60568 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.92■□□□□ 0.94
PLOD3O60568 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PLOD3O60568 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
PLOD3O60568 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.92■□□□□ 0.94
PLOD3O60568 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PLOD3O60568 AL356441.2-201ENST00000443009 864 ntBASIC20.91■□□□□ 0.94
PLOD3O60568 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.91■□□□□ 0.94
PLOD3O60568 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.91■□□□□ 0.94
PLOD3O60568 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PLOD3O60568 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.9■□□□□ 0.94
PLOD3O60568 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PLOD3O60568 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PLOD3O60568 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PLOD3O60568 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.9■□□□□ 0.94
PLOD3O60568 MIR3621-201ENST00000580529 85 ntBASIC20.9■□□□□ 0.94
PLOD3O60568 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.9■□□□□ 0.94
PLOD3O60568 AL117332.1-201ENST00000622628 974 ntBASIC20.9■□□□□ 0.94
PLOD3O60568 AL353803.4-201ENST00000565882 1934 ntBASIC20.9■□□□□ 0.94
PLOD3O60568 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PLOD3O60568 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.89■□□□□ 0.94
PLOD3O60568 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PLOD3O60568 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.89■□□□□ 0.94
PLOD3O60568 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.89■□□□□ 0.94
PLOD3O60568 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PLOD3O60568 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PLOD3O60568 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.89■□□□□ 0.93
PLOD3O60568 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.89■□□□□ 0.93
PLOD3O60568 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.89■□□□□ 0.93
PLOD3O60568 AL356740.2-201ENST00000601559 647 ntBASIC20.89■□□□□ 0.93
PLOD3O60568 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PLOD3O60568 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.89■□□□□ 0.93
PLOD3O60568 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
PLOD3O60568 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PLOD3O60568 C17orf82-201ENST00000623772 1530 ntBASIC20.88■□□□□ 0.93
PLOD3O60568 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PLOD3O60568 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PLOD3O60568 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PLOD3O60568 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.88■□□□□ 0.93
PLOD3O60568 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PLOD3O60568 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms