Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.3■□□□□ 0.36
PDE6DO43924 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PDE6DO43924 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDE6DO43924 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6DO43924 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6DO43924 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6DO43924 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PDE6DO43924 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6DO43924 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PDE6DO43924 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6DO43924 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDE6DO43924 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6DO43924 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6DO43924 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6DO43924 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6DO43924 DUX4L11-201ENST00000611504 1267 ntBASIC17.28■□□□□ 0.36
PDE6DO43924 DUX4L12-201ENST00000614593 1267 ntBASIC17.28■□□□□ 0.36
PDE6DO43924 DUX4L14-201ENST00000621227 1267 ntBASIC17.28■□□□□ 0.36
PDE6DO43924 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6DO43924 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDE6DO43924 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6DO43924 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PDE6DO43924 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDE6DO43924 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6DO43924 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDE6DO43924 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6DO43924 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDE6DO43924 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.27■□□□□ 0.36
PDE6DO43924 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6DO43924 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PDE6DO43924 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6DO43924 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6DO43924 SMPD5-203ENST00000639008 1464 ntBASIC17.26■□□□□ 0.35
PDE6DO43924 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 AL157400.5-201ENST00000507624 621 ntBASIC17.26■□□□□ 0.35
PDE6DO43924 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6DO43924 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDE6DO43924 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6DO43924 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6DO43924 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 AL022069.1-201ENST00000568025 1636 ntBASIC17.25■□□□□ 0.35
PDE6DO43924 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6DO43924 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PDE6DO43924 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6DO43924 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6DO43924 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms