Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC2O43543 C9orf163-202ENST00000624034 2573 ntBASIC19.33■□□□□ 0.69
XRCC2O43543 AL035685.1-201ENST00000636663 812 ntBASIC19.33■□□□□ 0.68
XRCC2O43543 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
XRCC2O43543 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC2O43543 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
XRCC2O43543 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
XRCC2O43543 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
XRCC2O43543 FP325331.1-202ENST00000623531 1380 ntBASIC19.32■□□□□ 0.68
XRCC2O43543 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
XRCC2O43543 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
XRCC2O43543 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC2O43543 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.32■□□□□ 0.68
XRCC2O43543 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.32■□□□□ 0.68
XRCC2O43543 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XRCC2O43543 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
XRCC2O43543 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.31■□□□□ 0.68
XRCC2O43543 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
XRCC2O43543 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
XRCC2O43543 MIR6724-1-201ENST00000616420 92 ntBASIC19.31■□□□□ 0.68
XRCC2O43543 MIR6724-2-201ENST00000616483 92 ntBASIC19.31■□□□□ 0.68
XRCC2O43543 MIR6724-4-201ENST00000617390 92 ntBASIC19.31■□□□□ 0.68
XRCC2O43543 MIR6724-3-201ENST00000622482 92 ntBASIC19.31■□□□□ 0.68
XRCC2O43543 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.31■□□□□ 0.68
XRCC2O43543 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XRCC2O43543 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
XRCC2O43543 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC2O43543 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC2O43543 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
XRCC2O43543 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.3■□□□□ 0.68
XRCC2O43543 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.3■□□□□ 0.68
XRCC2O43543 UNC93B8-201ENST00000511903 705 ntBASIC19.3■□□□□ 0.68
XRCC2O43543 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.3■□□□□ 0.68
XRCC2O43543 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.3■□□□□ 0.68
XRCC2O43543 LINC01529-204ENST00000636474 1715 ntBASIC19.3■□□□□ 0.68
XRCC2O43543 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC2O43543 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC2O43543 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XRCC2O43543 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.29■□□□□ 0.68
XRCC2O43543 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
XRCC2O43543 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.29■□□□□ 0.68
XRCC2O43543 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
XRCC2O43543 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.29■□□□□ 0.68
XRCC2O43543 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.29■□□□□ 0.68
XRCC2O43543 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
XRCC2O43543 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
XRCC2O43543 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.28■□□□□ 0.68
XRCC2O43543 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 KRT16P3-201ENST00000439127 1283 ntBASIC19.28■□□□□ 0.68
XRCC2O43543 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
XRCC2O43543 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.28■□□□□ 0.68
XRCC2O43543 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
XRCC2O43543 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
XRCC2O43543 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
XRCC2O43543 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
XRCC2O43543 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
XRCC2O43543 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
XRCC2O43543 AC009102.2-201ENST00000606772 1639 ntBASIC19.27■□□□□ 0.68
XRCC2O43543 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
XRCC2O43543 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
XRCC2O43543 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
XRCC2O43543 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms