Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDH17O14917 AC106739.1-201ENST00000617035 715 ntBASIC21.24■□□□□ 0.99
PCDH17O14917 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDH17O14917 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDH17O14917 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDH17O14917 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH17O14917 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH17O14917 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
PCDH17O14917 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH17O14917 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCDH17O14917 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDH17O14917 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH17O14917 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDH17O14917 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH17O14917 AC009102.2-201ENST00000606772 1639 ntBASIC21.22■□□□□ 0.99
PCDH17O14917 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH17O14917 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH17O14917 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH17O14917 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH17O14917 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
PCDH17O14917 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDH17O14917 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH17O14917 AL138724.1-201ENST00000606771 1088 ntBASIC21.22■□□□□ 0.99
PCDH17O14917 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDH17O14917 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH17O14917 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDH17O14917 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH17O14917 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDH17O14917 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH17O14917 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH17O14917 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH17O14917 AC005837.3-201ENST00000612163 286 ntBASIC21.21■□□□□ 0.99
PCDH17O14917 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH17O14917 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH17O14917 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDH17O14917 C17orf82-201ENST00000623772 1530 ntBASIC21.2■□□□□ 0.98
PCDH17O14917 UNC93B3-201ENST00000308076 687 ntBASIC21.2■□□□□ 0.98
PCDH17O14917 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDH17O14917 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCDH17O14917 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH17O14917 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH17O14917 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDH17O14917 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH17O14917 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH17O14917 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH17O14917 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH17O14917 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH17O14917 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH17O14917 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH17O14917 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH17O14917 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDH17O14917 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH17O14917 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH17O14917 AC135279.3-201ENST00000610945 1311 ntBASIC21.19■□□□□ 0.98
PCDH17O14917 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH17O14917 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PCDH17O14917 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH17O14917 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH17O14917 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH17O14917 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDH17O14917 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH17O14917 EDA-201ENST00000338901 1233 ntBASIC21.18■□□□□ 0.98
PCDH17O14917 PBX2P1-201ENST00000493219 1291 ntBASIC21.18■□□□□ 0.98
PCDH17O14917 AL136162.1-201ENST00000607711 1078 ntBASIC21.18■□□□□ 0.98
PCDH17O14917 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH17O14917 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH17O14917 SYT6-210ENST00000641643 1587 ntBASIC21.18■□□□□ 0.98
PCDH17O14917 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH17O14917 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH17O14917 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH17O14917 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH17O14917 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDH17O14917 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH17O14917 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH17O14917 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH17O14917 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH17O14917 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH17O14917 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH17O14917 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDH17O14917 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms