Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NTN3O00634 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.43■■□□□ 1.02
NTN3O00634 AC144652.1-201ENST00000609974 1624 ntBASIC21.43■■□□□ 1.02
NTN3O00634 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NTN3O00634 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NTN3O00634 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.43■■□□□ 1.02
NTN3O00634 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NTN3O00634 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NTN3O00634 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NTN3O00634 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.42■■□□□ 1.02
NTN3O00634 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NTN3O00634 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
NTN3O00634 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NTN3O00634 TERF1P2-201ENST00000583350 1212 ntBASIC21.42■■□□□ 1.02
NTN3O00634 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
NTN3O00634 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NTN3O00634 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.42■■□□□ 1.02
NTN3O00634 LINC01529-204ENST00000636474 1715 ntBASIC21.42■■□□□ 1.02
NTN3O00634 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NTN3O00634 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NTN3O00634 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.41■■□□□ 1.02
NTN3O00634 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.41■■□□□ 1.02
NTN3O00634 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.41■■□□□ 1.02
NTN3O00634 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.41■■□□□ 1.02
NTN3O00634 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.41■■□□□ 1.02
NTN3O00634 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NTN3O00634 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.41■■□□□ 1.02
NTN3O00634 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.41■■□□□ 1.02
NTN3O00634 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NTN3O00634 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NTN3O00634 LINC02228-203ENST00000641970 1355 ntBASIC21.4■■□□□ 1.02
NTN3O00634 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.4■■□□□ 1.02
NTN3O00634 KRT18P14-201ENST00000534205 1250 ntBASIC21.4■■□□□ 1.02
NTN3O00634 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NTN3O00634 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NTN3O00634 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NTN3O00634 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NTN3O00634 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NTN3O00634 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NTN3O00634 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
NTN3O00634 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NTN3O00634 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NTN3O00634 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.39■■□□□ 1.01
NTN3O00634 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NTN3O00634 AC142381.3-201ENST00000568208 1670 ntBASIC21.39■■□□□ 1.01
NTN3O00634 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
NTN3O00634 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NTN3O00634 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.39■■□□□ 1.01
NTN3O00634 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NTN3O00634 AC138932.3-201ENST00000567634 1902 ntBASIC21.39■■□□□ 1.01
NTN3O00634 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.39■■□□□ 1.01
NTN3O00634 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NTN3O00634 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.38■■□□□ 1.01
NTN3O00634 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
NTN3O00634 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.38■■□□□ 1.01
NTN3O00634 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
NTN3O00634 NTF6G-201ENST00000591094 616 ntBASIC21.38■■□□□ 1.01
NTN3O00634 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.38■■□□□ 1.01
NTN3O00634 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NTN3O00634 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NTN3O00634 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
NTN3O00634 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.37■■□□□ 1.01
NTN3O00634 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NTN3O00634 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NTN3O00634 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NTN3O00634 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NTN3O00634 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.37■■□□□ 1.01
NTN3O00634 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NTN3O00634 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.36■■□□□ 1.01
NTN3O00634 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.36■■□□□ 1.01
NTN3O00634 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NTN3O00634 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NTN3O00634 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
NTN3O00634 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.36■■□□□ 1.01
NTN3O00634 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.36■■□□□ 1.01
NTN3O00634 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NTN3O00634 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms