Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.84■■□□□ 1.09
TMX2-CTNND1H3BSU7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMX2-CTNND1H3BSU7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TMX2-CTNND1H3BSU7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TMX2-CTNND1H3BSU7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 LINC01124-201ENST00000409786 2117 ntBASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.82■■□□□ 1.08
TMX2-CTNND1H3BSU7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 AC099791.1-201ENST00000416440 715 ntBASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 AC233992.3-201ENST00000607491 485 ntBASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.81■■□□□ 1.08
TMX2-CTNND1H3BSU7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMX2-CTNND1H3BSU7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 AC009086.3-201ENST00000623486 1008 ntBASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 C9orf163-202ENST00000624034 2573 ntBASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMX2-CTNND1H3BSU7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 BX842568.3-201ENST00000418104 571 ntBASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.78■■□□□ 1.08
TMX2-CTNND1H3BSU7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMX2-CTNND1H3BSU7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMX2-CTNND1H3BSU7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMX2-CTNND1H3BSU7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.77■■□□□ 1.08
TMX2-CTNND1H3BSU7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.77■■□□□ 1.08
TMX2-CTNND1H3BSU7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMX2-CTNND1H3BSU7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.75■■□□□ 1.07
TMX2-CTNND1H3BSU7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.75■■□□□ 1.07
TMX2-CTNND1H3BSU7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.75■■□□□ 1.07
TMX2-CTNND1H3BSU7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TMX2-CTNND1H3BSU7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 MIR3181-201ENST00000578512 73 ntBASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.74■■□□□ 1.07
TMX2-CTNND1H3BSU7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms