Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMX3A6NHT5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMX3A6NHT5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.31■□□□□ 0.68
HMX3A6NHT5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.31■□□□□ 0.68
HMX3A6NHT5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMX3A6NHT5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMX3A6NHT5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.31■□□□□ 0.68
HMX3A6NHT5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMX3A6NHT5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HMX3A6NHT5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMX3A6NHT5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.3■□□□□ 0.68
HMX3A6NHT5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.29■□□□□ 0.68
HMX3A6NHT5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 MIR639-201ENST00000384974 98 ntBASIC19.29■□□□□ 0.68
HMX3A6NHT5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.29■□□□□ 0.68
HMX3A6NHT5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.29■□□□□ 0.68
HMX3A6NHT5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 AC139530.1-201ENST00000575312 1977 ntBASIC19.29■□□□□ 0.68
HMX3A6NHT5 AC007952.6-201ENST00000573168 2673 ntBASIC19.29■□□□□ 0.68
HMX3A6NHT5 AC003957.1-201ENST00000625108 2673 ntBASIC19.29■□□□□ 0.68
HMX3A6NHT5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HMX3A6NHT5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMX3A6NHT5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HMX3A6NHT5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 AL391422.3-201ENST00000603791 2761 ntBASIC19.28■□□□□ 0.68
HMX3A6NHT5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMX3A6NHT5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.28■□□□□ 0.68
HMX3A6NHT5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.28■□□□□ 0.68
HMX3A6NHT5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HMX3A6NHT5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMX3A6NHT5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HMX3A6NHT5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HMX3A6NHT5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HMX3A6NHT5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMX3A6NHT5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.27■□□□□ 0.67
HMX3A6NHT5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMX3A6NHT5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMX3A6NHT5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMX3A6NHT5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.26■□□□□ 0.67
HMX3A6NHT5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.26■□□□□ 0.67
HMX3A6NHT5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMX3A6NHT5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HMX3A6NHT5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.26■□□□□ 0.67
HMX3A6NHT5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.25■□□□□ 0.67
HMX3A6NHT5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HMX3A6NHT5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMX3A6NHT5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMX3A6NHT5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms