Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 AL353803.4-201ENST00000565882 1934 ntBASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 AL592293.1-201ENST00000502889 1188 ntBASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV27A0A0K0K1C4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 AL024507.2-201ENST00000606070 2574 ntBASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV27A0A0K0K1C4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TRBV27A0A0K0K1C4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRBV27A0A0K0K1C4 AL137060.1-201ENST00000618151 2648 ntBASIC15.77■□□□□ 0.11
TRBV27A0A0K0K1C4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV27A0A0K0K1C4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 AC022616.5-201ENST00000518796 181 ntBASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV27A0A0K0K1C4 RNF126P1-201ENST00000567452 1320 ntBASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 DUX4L9-201ENST00000449051 1259 ntBASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 AC080038.3-201ENST00000623346 1952 ntBASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV27A0A0K0K1C4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 MIR4449-201ENST00000578365 66 ntBASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 FBXW4P1-201ENST00000426721 2239 ntBASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV27A0A0K0K1C4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV27A0A0K0K1C4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms