Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
TRAV5A0A0B4J249 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 U85056.1-201ENST00000616429 682 ntBASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV5A0A0B4J249 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 AL137060.1-201ENST00000618151 2648 ntBASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV5A0A0B4J249 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 AL353803.4-201ENST00000565882 1934 ntBASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV5A0A0B4J249 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV5A0A0B4J249 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV5A0A0B4J249 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV5A0A0B4J249 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV5A0A0B4J249 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV5A0A0B4J249 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV5A0A0B4J249 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 AC139530.1-201ENST00000575312 1977 ntBASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV5A0A0B4J249 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms