Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 AC241377.3-202ENST00000626088 1088 ntBASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 AC241585.3-202ENST00000628937 1088 ntBASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 AC245100.8-202ENST00000629247 1058 ntBASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 AC079630.1-202ENST00000618127 1840 ntBASIC16.8■□□□□ 0.28
TRAV2A0A0B4J234 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 DUX4L4-201ENST00000566884 1269 ntBASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 LINC01529-204ENST00000636474 1715 ntBASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV2A0A0B4J234 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 DUSP8P5-201ENST00000422884 1815 ntBASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 AC092171.4-201ENST00000609130 632 ntBASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV2A0A0B4J234 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 DUSP8P3-201ENST00000399571 1760 ntBASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV2A0A0B4J234 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.77■□□□□ 0.27
TRAV2A0A0B4J234 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV2A0A0B4J234 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV2A0A0B4J234 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV2A0A0B4J234 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV2A0A0B4J234 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms