Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 OR2I1P-207ENST00000453522 948 ntBASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRAV19A0A0A6YYK7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AL139125.2-201ENST00000623134 1869 ntBASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 IGHV3-19-201ENST00000521488 291 ntBASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AC087623.3-201ENST00000607047 1098 ntBASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AC092666.2-201ENST00000613287 246 ntBASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.19■■□□□ 1.3
TRAV19A0A0A6YYK7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRAV19A0A0A6YYK7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 AC104564.3-201ENST00000582367 638 ntBASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 AC010525.1-201ENST00000585559 441 ntBASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRAV19A0A0A6YYK7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRAV19A0A0A6YYK7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 AC004812.2-201ENST00000611079 2094 ntBASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRAV19A0A0A6YYK7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
TRAV19A0A0A6YYK7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
TRAV19A0A0A6YYK7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAV19A0A0A6YYK7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRAV19A0A0A6YYK7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAV19A0A0A6YYK7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRAV19A0A0A6YYK7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRAV19A0A0A6YYK7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.13■■□□□ 1.29
TRAV19A0A0A6YYK7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms