Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 RNF126P1-201ENST00000567452 1320 ntBASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 AC011551.1-201ENST00000614101 683 ntBASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.89■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-1A0A0A6YYK1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV8-1A0A0A6YYK1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-1A0A0A6YYK1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-1A0A0A6YYK1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-1A0A0A6YYK1 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms