Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 AC080038.3-201ENST00000623346 1952 ntBASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV9-1A0A075B6T8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV9-1A0A075B6T8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV9-1A0A075B6T8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TRAV9-1A0A075B6T8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV9-1A0A075B6T8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV9-1A0A075B6T8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV9-1A0A075B6T8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 AC005229.4-201ENST00000610085 2198 ntBASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV9-1A0A075B6T8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 AC010542.4-201ENST00000563151 1910 ntBASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV9-1A0A075B6T8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV9-1A0A075B6T8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 AC097358.2-201ENST00000607541 1159 ntBASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV9-1A0A075B6T8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV9-1A0A075B6T8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms