Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.54□□□□□ -0.72
VGLL1Q99990 BOLA2P3-201ENST00000404566 256 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VGLL1Q99990 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.54□□□□□ -0.72
VGLL1Q99990 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 AC079316.1-201ENST00000548397 411 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.54□□□□□ -0.72
VGLL1Q99990 AC005225.4-201ENST00000557330 545 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 AC008687.7-202ENST00000637404 953 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 AL022323.5-201ENST00000624101 2059 ntBASIC10.54□□□□□ -0.72
VGLL1Q99990 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VGLL1Q99990 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC10.54□□□□□ -0.72
VGLL1Q99990 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.54□□□□□ -0.72
VGLL1Q99990 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
VGLL1Q99990 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VGLL1Q99990 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
VGLL1Q99990 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 PI4KAP2-201ENST00000360806 2080 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 HIST1H2BPS3-201ENST00000419683 341 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.53□□□□□ -0.72
VGLL1Q99990 XBP1P1-201ENST00000436573 652 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 KLF2P4-201ENST00000451959 1225 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 CTBP2P5-201ENST00000454986 1264 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.53□□□□□ -0.72
VGLL1Q99990 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 MIR4741-201ENST00000579822 90 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.53□□□□□ -0.72
VGLL1Q99990 AC012645.4-201ENST00000610691 1061 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 AC105233.6-201ENST00000642093 218 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 AGGF1P10-201ENST00000635005 2191 ntBASIC10.53□□□□□ -0.72
VGLL1Q99990 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
VGLL1Q99990 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC10.53□□□□□ -0.72
VGLL1Q99990 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
VGLL1Q99990 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms