Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 MIR1249-201ENST00000408671 66 ntBASIC8.8□□□□□ -1
VPS13DQ5THJ4 FP325317.1-201ENST00000539936 1042 ntBASIC8.8□□□□□ -1
VPS13DQ5THJ4 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
VPS13DQ5THJ4 AL353997.3-201ENST00000586597 589 ntBASIC8.8□□□□□ -1
VPS13DQ5THJ4 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC8.8□□□□□ -1
VPS13DQ5THJ4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VPS13DQ5THJ4 POM121L14P-201ENST00000406100 1558 ntBASIC8.8□□□□□ -1
VPS13DQ5THJ4 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 RPL18P1-201ENST00000497218 552 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC131274.3-201ENST00000578745 1271 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC108082.1-201ENST00000510857 331 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC073585.1-201ENST00000368895 1328 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC073862.3-201ENST00000624597 1648 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 SNORD88B-201ENST00000408454 91 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC010182.1-201ENST00000548943 2434 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 AC107375.1-201ENST00000564464 2231 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC8.79□□□□□ -1
VPS13DQ5THJ4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VPS13DQ5THJ4 AL358781.1-202ENST00000321081 1360 ntBASIC8.79□□□□□ -1
VPS13DQ5THJ4 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 PKMP1-201ENST00000455804 1523 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC074019.1-201ENST00000428788 1096 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC009517.1-201ENST00000454750 570 ntBASIC8.78□□□□□ -1
VPS13DQ5THJ4 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
VPS13DQ5THJ4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms