Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RFC3P40938 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.7□□□□□ -0.38
RFC3P40938 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RFC3P40938 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.7□□□□□ -0.38
RFC3P40938 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 AC100858.1-201ENST00000514059 1228 ntBASIC12.7□□□□□ -0.38
RFC3P40938 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 SNORD3B-1-201ENST00000577988 758 ntBASIC12.7□□□□□ -0.38
RFC3P40938 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 AC006158.1-201ENST00000610661 249 ntBASIC12.7□□□□□ -0.38
RFC3P40938 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.7□□□□□ -0.38
RFC3P40938 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 AC016397.2-201ENST00000624848 1985 ntBASIC12.7□□□□□ -0.38
RFC3P40938 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 PEG13-201ENST00000631594 5667 ntBASIC12.7□□□□□ -0.38
RFC3P40938 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RFC3P40938 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.7□□□□□ -0.38
RFC3P40938 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFC3P40938 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.7□□□□□ -0.38
RFC3P40938 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 AL118506.1-201ENST00000601296 3082 ntBASIC12.69□□□□□ -0.38
RFC3P40938 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFC3P40938 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RFC3P40938 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.69□□□□□ -0.38
RFC3P40938 PRSS3P1-201ENST00000503996 742 ntBASIC12.69□□□□□ -0.38
RFC3P40938 PGAM1P12-201ENST00000505622 748 ntBASIC12.69□□□□□ -0.38
RFC3P40938 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
RFC3P40938 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms