Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
XPAP23025 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 AC010336.1-201ENST00000539278 4739 ntBASIC13.95□□□□□ -0.18
XPAP23025 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 RNVU1-8-201ENST00000364272 125 ntBASIC13.95□□□□□ -0.18
XPAP23025 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
XPAP23025 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.95□□□□□ -0.18
XPAP23025 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.95□□□□□ -0.18
XPAP23025 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.95□□□□□ -0.18
XPAP23025 AC007952.4-201ENST00000573866 637 ntBASIC13.95□□□□□ -0.18
XPAP23025 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.95□□□□□ -0.18
XPAP23025 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.95□□□□□ -0.18
XPAP23025 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 AL009176.1-201ENST00000607876 650 ntBASIC13.95□□□□□ -0.18
XPAP23025 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 GRK6P1-201ENST00000400595 1711 ntBASIC13.95□□□□□ -0.18
XPAP23025 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.95□□□□□ -0.18
XPAP23025 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
XPAP23025 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 AC011481.3-201ENST00000623895 5594 ntBASIC13.95□□□□□ -0.18
XPAP23025 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
XPAP23025 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 AC020763.3-201ENST00000625095 2904 ntBASIC13.94□□□□□ -0.18
XPAP23025 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.94□□□□□ -0.18
XPAP23025 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 OR7E115P-201ENST00000382617 1024 ntBASIC13.94□□□□□ -0.18
XPAP23025 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 AC007279.1-201ENST00000448547 837 ntBASIC13.94□□□□□ -0.18
XPAP23025 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.94□□□□□ -0.18
XPAP23025 AC104784.1-201ENST00000473096 294 ntBASIC13.94□□□□□ -0.18
XPAP23025 TMCO5B-205ENST00000530020 894 ntBASIC13.94□□□□□ -0.18
XPAP23025 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 MIR4649-201ENST00000582839 64 ntBASIC13.94□□□□□ -0.18
XPAP23025 MIR5572-201ENST00000583188 137 ntBASIC13.94□□□□□ -0.18
XPAP23025 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 MIR6858-201ENST00000620733 67 ntBASIC13.94□□□□□ -0.18
XPAP23025 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.94□□□□□ -0.18
XPAP23025 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.94□□□□□ -0.18
XPAP23025 AC090502.4-201ENST00000551714 1386 ntBASIC13.94□□□□□ -0.18
XPAP23025 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
XPAP23025 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.93□□□□□ -0.18
XPAP23025 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
XPAP23025 AF013593.1-201ENST00000458074 1487 ntBASIC13.93□□□□□ -0.18
XPAP23025 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
XPAP23025 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms