Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.71□□□□□ -0.53
HLA-AP01891 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
HLA-AP01891 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HLA-AP01891 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
HLA-AP01891 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 AC103592.1-201ENST00000394513 664 ntBASIC11.71□□□□□ -0.53
HLA-AP01891 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-AP01891 TMEM14DP-201ENST00000422205 345 ntBASIC11.71□□□□□ -0.53
HLA-AP01891 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
HLA-AP01891 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.71□□□□□ -0.53
HLA-AP01891 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.71□□□□□ -0.53
HLA-AP01891 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-AP01891 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-AP01891 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-AP01891 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-AP01891 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
HLA-AP01891 RPSAP52-203ENST00000622976 1023 ntBASIC11.71□□□□□ -0.53
HLA-AP01891 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.71□□□□□ -0.53
HLA-AP01891 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
HLA-AP01891 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
HLA-AP01891 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
HLA-AP01891 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.71□□□□□ -0.54
HLA-AP01891 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-AP01891 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-AP01891 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 AC073335.2-201ENST00000610177 3441 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 AC134312.5-201ENST00000568031 1313 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
HLA-AP01891 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
HLA-AP01891 AL512384.1-201ENST00000406683 331 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 AC009486.1-201ENST00000569860 813 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 MIR5189-201ENST00000577370 114 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HLA-AP01891 REXO1L6P-201ENST00000603433 1515 ntBASIC11.7□□□□□ -0.54
HLA-AP01891 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-AP01891 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-AP01891 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms