Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC15.22■□□□□ 0.03
TM4SF4P48230 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC15.22■□□□□ 0.03
TM4SF4P48230 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 MFSD12-215ENST00000615613 688 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 AC002511.3-201ENST00000638098 420 ntBASIC15.22■□□□□ 0.03
TM4SF4P48230 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TM4SF4P48230 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM4SF4P48230 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TM4SF4P48230 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC15.21■□□□□ 0.03
TM4SF4P48230 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.21■□□□□ 0.03
TM4SF4P48230 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC15.21■□□□□ 0.03
TM4SF4P48230 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC15.21■□□□□ 0.03
TM4SF4P48230 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC15.21■□□□□ 0.03
TM4SF4P48230 RN7SL483P-201ENST00000478417 285 ntBASIC15.21■□□□□ 0.03
TM4SF4P48230 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC15.21■□□□□ 0.03
TM4SF4P48230 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 OR5BA1P-201ENST00000529722 982 ntBASIC15.21■□□□□ 0.03
TM4SF4P48230 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.21■□□□□ 0.03
TM4SF4P48230 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC15.21■□□□□ 0.03
TM4SF4P48230 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 MIR1914-201ENST00000607800 80 ntBASIC15.21■□□□□ 0.03
TM4SF4P48230 OR4C3-202ENST00000611380 597 ntBASIC15.21■□□□□ 0.03
TM4SF4P48230 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC15.21■□□□□ 0.03
TM4SF4P48230 AL139823.1-201ENST00000641871 1225 ntBASIC15.21■□□□□ 0.03
TM4SF4P48230 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TM4SF4P48230 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM4SF4P48230 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TM4SF4P48230 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC15.21■□□□□ 0.02
TM4SF4P48230 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TM4SF4P48230 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.21■□□□□ 0.02
TM4SF4P48230 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
TM4SF4P48230 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM4SF4P48230 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.21■□□□□ 0.02
TM4SF4P48230 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC15.21■□□□□ 0.02
TM4SF4P48230 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM4SF4P48230 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TM4SF4P48230 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.21■□□□□ 0.02
TM4SF4P48230 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.21■□□□□ 0.02
TM4SF4P48230 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TM4SF4P48230 AC073488.1-201ENST00000416620 1600 ntBASIC15.21■□□□□ 0.02
TM4SF4P48230 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC15.21■□□□□ 0.02
TM4SF4P48230 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TM4SF4P48230 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 AC096677.3-201ENST00000413162 387 ntBASIC15.2■□□□□ 0.02
TM4SF4P48230 PFN1P10-201ENST00000455962 327 ntBASIC15.2■□□□□ 0.02
TM4SF4P48230 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC15.2■□□□□ 0.02
TM4SF4P48230 RN7SL750P-201ENST00000582814 238 ntBASIC15.2■□□□□ 0.02
TM4SF4P48230 RN7SL322P-201ENST00000583519 299 ntBASIC15.2■□□□□ 0.02
TM4SF4P48230 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 AL928654.5-201ENST00000624831 2501 ntBASIC15.2■□□□□ 0.02
TM4SF4P48230 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM4SF4P48230 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM4SF4P48230 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.2■□□□□ 0.02
TM4SF4P48230 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms