Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 FAM21EP-201ENST00000417804 985 ntBASIC11.88□□□□□ -0.51
CD40P25942 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 RPL13AP19-201ENST00000434320 584 ntBASIC11.88□□□□□ -0.51
CD40P25942 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 BAK1P2-201ENST00000532665 631 ntBASIC11.88□□□□□ -0.51
CD40P25942 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC11.88□□□□□ -0.51
CD40P25942 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 AL136982.5-201ENST00000605222 294 ntBASIC11.88□□□□□ -0.51
CD40P25942 AC073592.2-201ENST00000623062 780 ntBASIC11.88□□□□□ -0.51
CD40P25942 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 AL365181.3-201ENST00000605886 3222 ntBASIC11.88□□□□□ -0.51
CD40P25942 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD40P25942 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC11.88□□□□□ -0.51
CD40P25942 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CD40P25942 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 AC011474.4-201ENST00000623523 2076 ntBASIC11.87□□□□□ -0.51
CD40P25942 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 SNORA50C-201ENST00000408535 133 ntBASIC11.87□□□□□ -0.51
CD40P25942 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC11.87□□□□□ -0.51
CD40P25942 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CD40P25942 RN7SL351P-201ENST00000469306 248 ntBASIC11.87□□□□□ -0.51
CD40P25942 RN7SL396P-201ENST00000471086 295 ntBASIC11.87□□□□□ -0.51
CD40P25942 RN7SL582P-201ENST00000491078 279 ntBASIC11.87□□□□□ -0.51
CD40P25942 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 C2orf69P1-201ENST00000563532 1093 ntBASIC11.87□□□□□ -0.51
CD40P25942 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC11.87□□□□□ -0.51
CD40P25942 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 CSTP2-201ENST00000610599 398 ntBASIC11.87□□□□□ -0.51
CD40P25942 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 SNORA50.1-201ENST00000628590 135 ntBASIC11.87□□□□□ -0.51
CD40P25942 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.87□□□□□ -0.51
CD40P25942 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD40P25942 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.87□□□□□ -0.51
CD40P25942 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms