Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 FMO6P-201ENST00000236166 1620 ntBASIC15.54■□□□□ 0.08
TPM3P06753 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 E2F3P2-201ENST00000447755 1422 ntBASIC15.54■□□□□ 0.08
TPM3P06753 MICA-210ENST00000616296 2260 ntTSL 5 BASIC15.54■□□□□ 0.08
TPM3P06753 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 DGCR5-201ENST00000399539 862 ntBASIC15.54■□□□□ 0.08
TPM3P06753 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.54■□□□□ 0.08
TPM3P06753 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.54■□□□□ 0.08
TPM3P06753 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 AC007389.4-201ENST00000454674 793 ntBASIC15.54■□□□□ 0.08
TPM3P06753 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 AC078819.1-201ENST00000547454 765 ntBASIC15.54■□□□□ 0.08
TPM3P06753 AC012085.1-201ENST00000548270 765 ntBASIC15.54■□□□□ 0.08
TPM3P06753 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.54■□□□□ 0.08
TPM3P06753 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.54■□□□□ 0.08
TPM3P06753 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM3P06753 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 LPO-204ENST00000543544 2350 ntTSL 2 BASIC15.54■□□□□ 0.08
TPM3P06753 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 FAM95B1-212ENST00000592873 4692 ntBASIC15.53■□□□□ 0.08
TPM3P06753 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC15.53■□□□□ 0.08
TPM3P06753 RPL13AP3-202ENST00000494676 1473 ntBASIC15.53■□□□□ 0.08
TPM3P06753 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TPM3P06753 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TPM3P06753 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.53■□□□□ 0.08
TPM3P06753 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.53■□□□□ 0.08
TPM3P06753 BCRP2-202ENST00000447763 634 ntBASIC15.53■□□□□ 0.08
TPM3P06753 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TPM3P06753 CYMP-203ENST00000474680 1263 ntBASIC15.53■□□□□ 0.08
TPM3P06753 BCRP6-201ENST00000510112 632 ntBASIC15.53■□□□□ 0.08
TPM3P06753 BCRP7-201ENST00000511549 544 ntBASIC15.53■□□□□ 0.08
TPM3P06753 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 AC190387.1-201ENST00000551683 408 ntBASIC15.53■□□□□ 0.08
TPM3P06753 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC15.53■□□□□ 0.08
TPM3P06753 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TPM3P06753 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TPM3P06753 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TPM3P06753 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TPM3P06753 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.52■□□□□ 0.08
TPM3P06753 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TPM3P06753 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TPM3P06753 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM3P06753 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AHCYP4-201ENST00000419201 1315 ntBASIC15.52■□□□□ 0.08
TPM3P06753 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.52■□□□□ 0.08
TPM3P06753 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AC244394.1-201ENST00000435000 1665 ntBASIC15.52■□□□□ 0.08
TPM3P06753 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM3P06753 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms