Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RB1P06400 RBMX2P5-201ENST00000424312 969 ntBASIC14.42□□□□□ -0.1
RB1P06400 AC105443.1-201ENST00000433754 712 ntBASIC14.42□□□□□ -0.1
RB1P06400 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 B9D1-206ENST00000461069 923 ntTSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 AC108724.1-201ENST00000481669 352 ntBASIC14.42□□□□□ -0.1
RB1P06400 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.42□□□□□ -0.1
RB1P06400 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC14.42□□□□□ -0.1
RB1P06400 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.42□□□□□ -0.1
RB1P06400 AL353622.2-201ENST00000605846 425 ntBASIC14.42□□□□□ -0.1
RB1P06400 AC254633.1-201ENST00000606790 345 ntBASIC14.42□□□□□ -0.1
RB1P06400 AC148476.1-201ENST00000622182 705 ntBASIC14.42□□□□□ -0.1
RB1P06400 CR392039.2-201ENST00000623182 509 ntBASIC14.42□□□□□ -0.1
RB1P06400 AL590556.2-202ENST00000636906 844 ntBASIC14.42□□□□□ -0.1
RB1P06400 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 SBF1P1-201ENST00000444527 5631 ntBASIC14.42□□□□□ -0.1
RB1P06400 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RB1P06400 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RB1P06400 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.42□□□□□ -0.1
RB1P06400 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RB1P06400 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RB1P06400 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 AC067750.1-201ENST00000608826 6545 ntBASIC14.41□□□□□ -0.1
RB1P06400 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RB1P06400 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RB1P06400 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.41□□□□□ -0.1
RB1P06400 AL356653.1-201ENST00000402743 360 ntBASIC14.41□□□□□ -0.1
RB1P06400 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.41□□□□□ -0.1
RB1P06400 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.41□□□□□ -0.1
RB1P06400 AC006328.1-201ENST00000437571 379 ntBASIC14.41□□□□□ -0.1
RB1P06400 UGT1A12P-201ENST00000447084 853 ntBASIC14.41□□□□□ -0.1
RB1P06400 RPSAP16-201ENST00000447583 821 ntBASIC14.41□□□□□ -0.1
RB1P06400 RPL35P1-201ENST00000450819 370 ntBASIC14.41□□□□□ -0.1
RB1P06400 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 HNRNPA1P4-201ENST00000509706 756 ntBASIC14.41□□□□□ -0.1
RB1P06400 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.41□□□□□ -0.1
RB1P06400 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.41□□□□□ -0.1
RB1P06400 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.41□□□□□ -0.1
RB1P06400 AC012617.1-204ENST00000586340 2305 ntBASIC14.41□□□□□ -0.1
RB1P06400 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RB1P06400 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RB1P06400 AC007686.3-201ENST00000619017 3487 ntBASIC14.4□□□□□ -0.1
RB1P06400 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RB1P06400 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.4□□□□□ -0.1
RB1P06400 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
RB1P06400 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RB1P06400 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms