Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
P04436 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
P04436 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 Z98885.3-201ENST00000624882 1757 ntBASIC12.61□□□□□ -0.39
P04436 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.61□□□□□ -0.39
P04436 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
P04436 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
P04436 SALL4P6-201ENST00000429385 1691 ntBASIC12.61□□□□□ -0.39
P04436 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.61□□□□□ -0.39
P04436 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P04436 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P04436 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
P04436 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P04436 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P04436 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
P04436 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P04436 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
P04436 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.6□□□□□ -0.39
P04436 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.6□□□□□ -0.39
P04436 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.6□□□□□ -0.39
P04436 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.6□□□□□ -0.39
P04436 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 CES1P2-201ENST00000566467 1242 ntBASIC12.6□□□□□ -0.39
P04436 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.6□□□□□ -0.39
P04436 AC005777.1-201ENST00000588332 187 ntBASIC12.6□□□□□ -0.39
P04436 MIR8071-1-201ENST00000616769 65 ntBASIC12.6□□□□□ -0.39
P04436 MIR8071-2-201ENST00000616772 65 ntBASIC12.6□□□□□ -0.39
P04436 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 AL365181.3-201ENST00000605886 3222 ntBASIC12.6□□□□□ -0.39
P04436 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
P04436 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P04436 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P04436 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.6□□□□□ -0.39
P04436 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
P04436 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.6□□□□□ -0.39
P04436 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P04436 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P04436 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P04436 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P04436 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P04436 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04436 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.59□□□□□ -0.39
P04436 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P04436 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P04436 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.59□□□□□ -0.39
P04436 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P04436 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.59□□□□□ -0.39
P04436 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P04436 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.59□□□□□ -0.39
P04436 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.59□□□□□ -0.39
P04436 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P04436 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms