Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.94□□□□□ -0.66
IFNA1P01562 CICP9-201ENST00000444451 1913 ntBASIC10.94□□□□□ -0.66
IFNA1P01562 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 RN7SL399P-201ENST00000471648 279 ntBASIC10.94□□□□□ -0.66
IFNA1P01562 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.94□□□□□ -0.66
IFNA1P01562 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.94□□□□□ -0.66
IFNA1P01562 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.94□□□□□ -0.66
IFNA1P01562 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.94□□□□□ -0.66
IFNA1P01562 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 AL356740.1-201ENST00000602192 1297 ntBASIC10.94□□□□□ -0.66
IFNA1P01562 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.94□□□□□ -0.66
IFNA1P01562 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AL359510.2-201ENST00000624958 2249 ntBASIC10.94□□□□□ -0.66
IFNA1P01562 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
IFNA1P01562 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IFNA1P01562 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.94□□□□□ -0.66
IFNA1P01562 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
IFNA1P01562 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC138028.6-201ENST00000616106 1482 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 MCU-204ENST00000536019 3224 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 AL353593.1-201ENST00000602517 3955 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 AL162615.1-201ENST00000429893 1653 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 CCT8L1P-201ENST00000465400 1674 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.93□□□□□ -0.66
IFNA1P01562 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 AC004461.1-201ENST00000412461 403 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
IFNA1P01562 AL590627.1-203ENST00000421194 1026 ntBASIC10.93□□□□□ -0.66
IFNA1P01562 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.93□□□□□ -0.66
IFNA1P01562 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms