Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 AC126915.1-201ENST00000522847 1038 ntBASIC10.24□□□□□ -0.77
NACAE9PAV3 AP001258.2-201ENST00000529891 490 ntBASIC10.24□□□□□ -0.77
NACAE9PAV3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.24□□□□□ -0.77
NACAE9PAV3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.24□□□□□ -0.77
NACAE9PAV3 AC008825.2-201ENST00000603374 718 ntBASIC10.24□□□□□ -0.77
NACAE9PAV3 AC021016.3-201ENST00000608367 477 ntBASIC10.24□□□□□ -0.77
NACAE9PAV3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
NACAE9PAV3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.24□□□□□ -0.77
NACAE9PAV3 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
NACAE9PAV3 FMO6P-201ENST00000236166 1620 ntBASIC10.24□□□□□ -0.77
NACAE9PAV3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.24□□□□□ -0.77
NACAE9PAV3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.24□□□□□ -0.77
NACAE9PAV3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
NACAE9PAV3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
NACAE9PAV3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SACS-202ENST00000402364 15134 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 PDIA3P2-201ENST00000428073 158 ntBASIC10.23□□□□□ -0.77
NACAE9PAV3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC10.23□□□□□ -0.77
NACAE9PAV3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC10.23□□□□□ -0.77
NACAE9PAV3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC10.23□□□□□ -0.77
NACAE9PAV3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 LAP3P2-201ENST00000454686 1454 ntBASIC10.23□□□□□ -0.77
NACAE9PAV3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
NACAE9PAV3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 AC004241.5-201ENST00000623870 2448 ntBASIC10.23□□□□□ -0.77
NACAE9PAV3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 AL118506.1-201ENST00000601296 3082 ntBASIC10.23□□□□□ -0.77
NACAE9PAV3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
NACAE9PAV3 AL359845.1-201ENST00000458202 1648 ntBASIC10.23□□□□□ -0.77
NACAE9PAV3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
NACAE9PAV3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.23□□□□□ -0.77
NACAE9PAV3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NACAE9PAV3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NACAE9PAV3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
NACAE9PAV3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.22□□□□□ -0.77
NACAE9PAV3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
NACAE9PAV3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC10.22□□□□□ -0.77
NACAE9PAV3 HLA-DPB2-205ENST00000435074 1188 ntBASIC10.22□□□□□ -0.77
NACAE9PAV3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC10.22□□□□□ -0.77
NACAE9PAV3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.22□□□□□ -0.77
NACAE9PAV3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.22□□□□□ -0.77
NACAE9PAV3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms