Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AC009474.1-201ENST00000455096 1565 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AC026748.1-201ENST00000624349 3251 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AC116347.1-201ENST00000442824 720 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 RPS15P5-201ENST00000449885 432 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 RN7SL452P-201ENST00000482923 291 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 RN7SL678P-201ENST00000579533 299 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 CYP4F10P-201ENST00000589560 752 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 RBM22P2-201ENST00000393978 1814 ntBASIC15.17■□□□□ 0.02
LOC285556D6RIA3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LOC285556D6RIA3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 TPI1P3-201ENST00000335020 740 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 CASP2-203ENST00000392925 616 ntTSL 3 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 RN7SL2-201ENST00000490232 300 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 RN7SL4P-201ENST00000584058 295 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AL589743.3-201ENST00000604121 517 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 C2orf27AP1-201ENST00000618128 586 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 POM121L14P-201ENST00000406100 1558 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 MSNP1-201ENST00000511640 1732 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 CLUHP8-201ENST00000547527 1485 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 MKL1-204ENST00000402630 747 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 RPL13AP5-201ENST00000439189 612 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 HNRNPA1P73-201ENST00000446472 928 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC012100.1-201ENST00000470304 282 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 CCNL2P1-201ENST00000512846 969 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC105424.1-201ENST00000514583 209 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC091691.1-201ENST00000583587 1018 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 Z93930.2-203ENST00000585003 516 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC006273.1-201ENST00000606966 861 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AC127002.1-201ENST00000619123 455 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 AP000897.1-201ENST00000584036 1613 ntBASIC15.16■□□□□ 0.02
LOC285556D6RIA3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LOC285556D6RIA3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LOC285556D6RIA3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms