Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM235A6NFC5 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC012441.2-201ENST00000444843 739 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HOMER2P2-201ENST00000451621 847 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AL160314.3-201ENST00000556041 767 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC233724.13-201ENST00000598383 410 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AL355385.1-201ENST00000606123 409 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 CTAGE10P-201ENST00000318353 2408 ntBASIC11.84□□□□□ -0.51
TMEM235A6NFC5 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM235A6NFC5 AC012531.1-201ENST00000562848 2680 ntBASIC11.83□□□□□ -0.51
TMEM235A6NFC5 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM235A6NFC5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.83□□□□□ -0.52
TMEM235A6NFC5 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM235A6NFC5 AC018629.1-201ENST00000623381 1736 ntBASIC11.83□□□□□ -0.52
TMEM235A6NFC5 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TMEM235A6NFC5 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM235A6NFC5 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms