Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC015818.9-201ENST00000591705 4582 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MIR1908-201ENST00000410394 80 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC010141.1-201ENST00000411585 623 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 ALG3P1-201ENST00000508806 1114 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AC005695.3-201ENST00000614522 232 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 MIR6752-201ENST00000618442 71 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 AL590440.2-201ENST00000641973 1595 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 CICP1-201ENST00000416803 2410 ntBASIC12.29□□□□□ -0.44
DUX4Q9UBX2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
DUX4Q9UBX2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC012617.1-204ENST00000586340 2305 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC139712.1-201ENST00000378256 1875 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AL445209.1-201ENST00000607269 3491 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC079178.1-201ENST00000420915 656 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 KLF2P1-201ENST00000447438 1042 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 HSPB1P2-201ENST00000448722 546 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC103988.2-201ENST00000561804 725 ntBASIC12.28□□□□□ -0.44
DUX4Q9UBX2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
DUX4Q9UBX2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms