Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 TEKT4P2-202ENST00000559466 1312 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC097065.1-201ENST00000425737 517 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 KRT18P66-201ENST00000452970 1269 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 RN7SL788P-201ENST00000460504 316 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SIGLEC22P-201ENST00000599104 714 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 AL139424.3-202ENST00000641619 917 ntBASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CUEDC1Q9NWM3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 MEX3B-202ENST00000558133 4333 ntBASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 AC138761.6-201ENST00000583997 1423 ntBASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.46□□□□□ -0.26
CUEDC1Q9NWM3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.45□□□□□ -0.26
CUEDC1Q9NWM3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms