Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RAB40CQ96S21 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
RAB40CQ96S21 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC012531.1-201ENST00000562848 2680 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC124319.4-201ENST00000622931 2161 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 EIF4HP1-201ENST00000453115 687 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC106760.1-201ENST00000508690 800 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC003686.1-201ENST00000550956 1034 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 AL596325.1-201ENST00000563991 1082 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 MIR5189-201ENST00000577370 114 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC010319.3-201ENST00000597028 470 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC009884.2-201ENST00000603110 324 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC006453.4-201ENST00000636949 1252 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC018445.4-201ENST00000624066 2291 ntBASIC11.26□□□□□ -0.61
RAB40CQ96S21 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB40CQ96S21 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB40CQ96S21 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 KRT8P4-201ENST00000509735 1454 ntBASIC11.25□□□□□ -0.61
RAB40CQ96S21 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RAB40CQ96S21 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms