Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD4Q5XG99 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 OLA1P2-201ENST00000395519 1264 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 YY1P2-201ENST00000438766 948 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AC113398.1-201ENST00000464124 406 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 RNA5SP288-201ENST00000516075 93 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AP003040.1-201ENST00000532044 1024 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AC106782.5-201ENST00000616011 337 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 AL513497.1-201ENST00000624273 2083 ntBASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD4Q5XG99 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD4Q5XG99 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms