Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 MIR1307-201ENST00000408840 149 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AP000358.1-201ENST00000456260 156 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 FTH1P22-201ENST00000456305 520 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RN7SL67P-201ENST00000492147 296 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 SIGLEC22P-201ENST00000599104 714 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AF254983.2-201ENST00000612331 135 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 TEKT4P2-202ENST00000559466 1312 ntBASIC12.09□□□□□ -0.47
HIST1H3AP68431 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.09□□□□□ -0.47
HIST1H3AP68431 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HIST1H3AP68431 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
HIST1H3AP68431 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.08□□□□□ -0.47
HIST1H3AP68431 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
HIST1H3AP68431 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 Z82170.1-201ENST00000625081 3192 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 AL583805.1-201ENST00000391389 531 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HIST1H3AP68431 AL807761.2-201ENST00000422849 729 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 AC092573.1-201ENST00000433054 884 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 ACTG1P17-201ENST00000558391 1119 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 MIR4525-201ENST00000580000 75 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 RN7SL574P-201ENST00000581512 297 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 AC007326.1-201ENST00000604539 458 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
HIST1H3AP68431 MIR6799-201ENST00000620297 69 ntBASIC12.08□□□□□ -0.48
HIST1H3AP68431 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms