Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 AC064801.2-201ENST00000625052 1303 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 AC006001.1-201ENST00000325130 474 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 PUDPP3-201ENST00000445368 636 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN1P35523 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CLCN1P35523 AC005225.4-201ENST00000557330 545 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN1P35523 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN1P35523 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 AC073413.1-201ENST00000603927 732 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 AC107308.1-201ENST00000615897 301 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLCN1P35523 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCN1P35523 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCN1P35523 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCN1P35523 SALL4P6-201ENST00000429385 1691 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCN1P35523 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCN1P35523 AC091181.1-201ENST00000623762 2098 ntBASIC15.79■□□□□ 0.12
CLCN1P35523 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 KCTD21-AS1-207ENST00000600795 1549 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN1P35523 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 ARSEP1-201ENST00000420443 635 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 AL355994.1-201ENST00000424379 260 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN1P35523 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CLCN1P35523 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCN1P35523 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 CR383656.12-201ENST00000549567 513 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CLCN1P35523 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLCN1P35523 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AC108673.2-201ENST00000608909 565 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.78■□□□□ 0.12
CLCN1P35523 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 PPP1R26P1-201ENST00000474415 3613 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCN1P35523 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AC025183.3-201ENST00000623526 1482 ntBASIC15.78■□□□□ 0.12
CLCN1P35523 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCN1P35523 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCN1P35523 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCN1P35523 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCN1P35523 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCN1P35523 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms