Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 EEF1DP2-201ENST00000433698 843 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.69□□□□□ -0.54
COL8A2P25067 GNG10P1-201ENST00000452289 199 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 AC006529.1-201ENST00000459978 637 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 AC093300.1-201ENST00000510368 1201 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC11.69□□□□□ -0.54
COL8A2P25067 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC11.69□□□□□ -0.54
COL8A2P25067 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC11.69□□□□□ -0.54
COL8A2P25067 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
COL8A2P25067 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 HLA-C-210ENST00000640219 976 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 AL139424.3-202ENST00000641619 917 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
COL8A2P25067 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.69□□□□□ -0.54
COL8A2P25067 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
COL8A2P25067 AC117503.4-201ENST00000623229 1418 ntBASIC11.69□□□□□ -0.54
COL8A2P25067 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 AC093462.1-201ENST00000621167 1683 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
COL8A2P25067 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 FMO6P-201ENST00000236166 1620 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 AGAP10P-201ENST00000454844 2418 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 AL356585.2-201ENST00000625078 2396 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
COL8A2P25067 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
COL8A2P25067 STK16-203ENST00000409516 895 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC11.68□□□□□ -0.54
COL8A2P25067 AC097065.1-201ENST00000425737 517 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC11.68□□□□□ -0.54
COL8A2P25067 RPL13AP19-201ENST00000434320 584 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.68□□□□□ -0.54
COL8A2P25067 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC11.68□□□□□ -0.54
COL8A2P25067 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 AC025186.1-201ENST00000478174 870 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 AC093826.1-201ENST00000508655 993 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC11.68□□□□□ -0.54
COL8A2P25067 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.68□□□□□ -0.54
COL8A2P25067 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
COL8A2P25067 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 NUTM2HP-201ENST00000442076 2498 ntBASIC11.68□□□□□ -0.54
COL8A2P25067 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
COL8A2P25067 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
COL8A2P25067 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms