Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 SSR4P1-201ENST00000415143 412 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 CICP12-201ENST00000455801 843 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 RN7SL837P-201ENST00000463010 287 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.74□□□□□ -0.53
HLA-AP01891 TDH-203ENST00000531764 1110 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 AL596325.1-201ENST00000563991 1082 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.74□□□□□ -0.53
HLA-AP01891 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-AP01891 AC010319.3-201ENST00000597028 470 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-AP01891 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HLA-AP01891 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 AC011700.1-201ENST00000610409 2627 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-AP01891 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 DNM1P41-201ENST00000623634 3350 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-AP01891 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.74□□□□□ -0.53
HLA-AP01891 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HLA-AP01891 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-AP01891 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-AP01891 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
HLA-AP01891 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 FAM95B1-212ENST00000592873 4692 ntBASIC11.73□□□□□ -0.53
HLA-AP01891 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 FMO6P-201ENST00000236166 1620 ntBASIC11.73□□□□□ -0.53
HLA-AP01891 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
HLA-AP01891 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-AP01891 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.73□□□□□ -0.53
HLA-AP01891 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.73□□□□□ -0.53
HLA-AP01891 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 COX20P2-201ENST00000452636 358 ntBASIC11.73□□□□□ -0.53
HLA-AP01891 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-AP01891 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.73□□□□□ -0.53
HLA-AP01891 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 CCT8L1P-201ENST00000465400 1674 ntBASIC11.73□□□□□ -0.53
HLA-AP01891 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
HLA-AP01891 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-AP01891 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.73□□□□□ -0.53
HLA-AP01891 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-AP01891 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-AP01891 AC007952.5-201ENST00000572818 1486 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms