Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC022217.1-201ENST00000521069 738 ntBASIC11.84□□□□□ -0.51
SDCBPO00560 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.84□□□□□ -0.51
SDCBPO00560 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 AL160314.3-201ENST00000556041 767 ntBASIC11.84□□□□□ -0.51
SDCBPO00560 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.84□□□□□ -0.51
SDCBPO00560 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.84□□□□□ -0.51
SDCBPO00560 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.84□□□□□ -0.51
SDCBPO00560 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 AC092117.1-201ENST00000621230 3250 ntBASIC11.84□□□□□ -0.51
SDCBPO00560 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
SDCBPO00560 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
SDCBPO00560 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.84□□□□□ -0.51
SDCBPO00560 AHCYP4-201ENST00000419201 1315 ntBASIC11.84□□□□□ -0.51
SDCBPO00560 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
SDCBPO00560 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SDCBPO00560 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 FMO6P-201ENST00000236166 1620 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 AL358781.1-202ENST00000321081 1360 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 KRT8P29-201ENST00000420409 1371 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 AC103592.1-201ENST00000394513 664 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 SNORA50C-201ENST00000408535 133 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 BTBD6P1-201ENST00000412176 1267 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.83□□□□□ -0.52
SDCBPO00560 HSPB1P2-201ENST00000448722 546 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.83□□□□□ -0.52
SDCBPO00560 PGAM1P5-201ENST00000548011 764 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 RN7SL560P-201ENST00000577943 264 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.83□□□□□ -0.52
SDCBPO00560 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 SNORA50.1-201ENST00000628590 135 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 AL022323.5-201ENST00000624101 2059 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 AC010336.1-201ENST00000539278 4739 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 CYP4F23P-201ENST00000593402 1579 ntBASIC11.83□□□□□ -0.52
SDCBPO00560 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.83□□□□□ -0.52
SDCBPO00560 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SDCBPO00560 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.83□□□□□ -0.52
SDCBPO00560 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.82□□□□□ -0.52
SDCBPO00560 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SDCBPO00560 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms