Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.2■□□□□ 0.02
LOC285556D6RIA3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LOC285556D6RIA3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LOC285556D6RIA3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LOC285556D6RIA3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 TUBA3GP-201ENST00000410028 1325 ntBASIC15.19■□□□□ 0.02
LOC285556D6RIA3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 RNF7-205ENST00000480908 782 ntTSL 4 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AL109983.1-201ENST00000603234 646 ntBASIC15.19■□□□□ 0.02
LOC285556D6RIA3 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 TCAF1P1-201ENST00000414990 2232 ntBASIC15.19■□□□□ 0.02
LOC285556D6RIA3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC005840.4-201ENST00000541242 2494 ntBASIC15.19■□□□□ 0.02
LOC285556D6RIA3 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC131235.2-201ENST00000445553 1057 ntBASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 GDA-203ENST00000376986 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
LOC285556D6RIA3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AL359881.3-201ENST00000602640 1721 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 PRADC1P1-201ENST00000412317 525 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AC053503.3-201ENST00000448375 114 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 PEBP1P1-201ENST00000554856 510 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 PPY-202ENST00000587006 431 ntTSL 3 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 OR4C3-202ENST00000611380 597 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AC112702.1-201ENST00000623712 366 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 AC245369.8-201ENST00000636589 306 ntBASIC15.18■□□□□ 0.02
LOC285556D6RIA3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.18■□□□□ 0.02
LOC285556D6RIA3 LINC02228-204ENST00000642115 2962 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms