Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AP000533.1-201ENST00000456143 1177 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC147876.1-201ENST00000504408 322 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 BX322534.1-201ENST00000635574 241 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC215524.1-201ENST00000635696 241 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 KRT8P25-201ENST00000473150 1456 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 AC020910.6-201ENST00000623084 1459 ntBASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 AC093462.1-201ENST00000621167 1683 ntBASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CCDC187A0A096LP49 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 IGHEP1-201ENST00000521393 651 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 AC004686.1-201ENST00000605113 538 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 AC010531.8-201ENST00000623341 685 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 KRT8P42-201ENST00000405771 1399 ntBASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms