Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC130686.1-201ENST00000622936 2466 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AL627389.1-201ENST00000413508 1182 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC084752.1-201ENST00000509766 622 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC145285.5-201ENST00000562217 361 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC007952.4-201ENST00000573866 637 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AC140113.1-201ENST00000603467 169 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AGAP10P-201ENST00000454844 2418 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 AL590824.1-201ENST00000403828 1349 ntBASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPA1Q9UND3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AL805961.2-201ENST00000642139 4817 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AL157792.1-201ENST00000488281 530 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC095040.1-201ENST00000513286 675 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC005740.1-201ENST00000515639 522 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC068867.1-201ENST00000559855 150 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 LINC00431-202ENST00000636375 159 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 AC089987.1-201ENST00000551654 2209 ntBASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPA1Q9UND3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms