Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC138907.9-201ENST00000623747 986 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 PIGA-209ENST00000634582 965 ntTSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 MARK2P9-201ENST00000430958 1727 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC015959.1-201ENST00000623263 1377 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 MED20-204ENST00000409312 932 ntTSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 RPL21P135-201ENST00000442539 791 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 MIR4726-201ENST00000615971 58 ntBASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ALMS1Q8TCU4 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC005912.2-201ENST00000619492 2400 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 DDX6P2-201ENST00000619520 1455 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL929472.4-201ENST00000447422 691 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 P2RX6P-202ENST00000450626 357 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 PFN1P10-201ENST00000455962 327 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RN7SL733P-201ENST00000582253 329 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL512631.1-201ENST00000604086 840 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RN7SL248P-201ENST00000615117 329 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RN7SL453P-201ENST00000620275 329 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 ACTBP1-201ENST00000417985 1113 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SSR3-202ENST00000463503 596 ntTSL 4 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL928654.5-201ENST00000624831 2501 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL132656.1-201ENST00000452173 490 ntBASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC8.86□□□□□ -0.99
ALMS1Q8TCU4 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms