Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
BMP4P12644 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 MIR663B-201ENST00000408361 115 ntBASIC12.83□□□□□ -0.36
BMP4P12644 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC12.83□□□□□ -0.36
BMP4P12644 AL603841.1-201ENST00000430516 664 ntBASIC12.83□□□□□ -0.36
BMP4P12644 CALR4P-201ENST00000431943 946 ntBASIC12.83□□□□□ -0.36
BMP4P12644 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.83□□□□□ -0.36
BMP4P12644 AC007663.3-201ENST00000609632 465 ntBASIC12.83□□□□□ -0.36
BMP4P12644 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.83□□□□□ -0.36
BMP4P12644 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 FKBP4P6-201ENST00000457486 1332 ntBASIC12.83□□□□□ -0.36
BMP4P12644 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BMP4P12644 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BMP4P12644 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
BMP4P12644 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.82□□□□□ -0.36
BMP4P12644 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.82□□□□□ -0.36
BMP4P12644 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.82□□□□□ -0.36
BMP4P12644 FAM58BP-201ENST00000439056 645 ntBASIC12.82□□□□□ -0.36
BMP4P12644 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.82□□□□□ -0.36
BMP4P12644 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.82□□□□□ -0.36
BMP4P12644 HSPB1P2-201ENST00000448722 546 ntBASIC12.82□□□□□ -0.36
BMP4P12644 AKR7A2P1-201ENST00000460134 915 ntBASIC12.82□□□□□ -0.36
BMP4P12644 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC12.82□□□□□ -0.36
BMP4P12644 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.82□□□□□ -0.36
BMP4P12644 AC106820.3-201ENST00000561653 397 ntBASIC12.82□□□□□ -0.36
BMP4P12644 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 AC009955.4-201ENST00000597192 544 ntBASIC12.82□□□□□ -0.36
BMP4P12644 AC121493.1-201ENST00000602316 450 ntBASIC12.82□□□□□ -0.36
BMP4P12644 AC079791.1-201ENST00000605356 973 ntBASIC12.82□□□□□ -0.36
BMP4P12644 AL136295.7-201ENST00000619226 1200 ntBASIC12.82□□□□□ -0.36
BMP4P12644 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 AC073862.5-201ENST00000624129 2027 ntBASIC12.82□□□□□ -0.36
BMP4P12644 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BMP4P12644 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
BMP4P12644 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms