Protein–RNA interactions for Protein: C9JL84

HHLA1, HERV-H LTR-associating protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA1C9JL84 AC008972.2-201ENST00000606587 494 ntBASIC14.3□□□□□ -0.12
HHLA1C9JL84 AC006158.1-201ENST00000610661 249 ntBASIC14.3□□□□□ -0.12
HHLA1C9JL84 MIR6727-201ENST00000620702 65 ntBASIC14.3□□□□□ -0.12
HHLA1C9JL84 AC073869.4-201ENST00000620841 800 ntBASIC14.3□□□□□ -0.12
HHLA1C9JL84 AC127024.7-201ENST00000625101 200 ntBASIC14.3□□□□□ -0.12
HHLA1C9JL84 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HHLA1C9JL84 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HHLA1C9JL84 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 OR2I1P-209ENST00000641730 5365 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 TUBB2BP1-201ENST00000404155 871 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 AC104212.2-201ENST00000478813 628 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 MIR4472-1-201ENST00000584349 80 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 CSTP2-201ENST00000610599 398 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 GBAP1-208ENST00000566701 1546 ntBASIC14.29□□□□□ -0.12
HHLA1C9JL84 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HHLA1C9JL84 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HHLA1C9JL84 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 AQP7P5-201ENST00000428759 1049 ntBASIC14.28□□□□□ -0.12
HHLA1C9JL84 GCSHP3-201ENST00000431120 391 ntBASIC14.28□□□□□ -0.12
HHLA1C9JL84 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 AQP7P4-201ENST00000447083 1042 ntBASIC14.28□□□□□ -0.12
HHLA1C9JL84 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.28□□□□□ -0.12
HHLA1C9JL84 AQP7P2-201ENST00000453967 1041 ntBASIC14.28□□□□□ -0.12
HHLA1C9JL84 RN7SL351P-201ENST00000469306 248 ntBASIC14.28□□□□□ -0.12
HHLA1C9JL84 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HHLA1C9JL84 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms