Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AC006987.1-201ENST00000413610 527 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AC114501.1-201ENST00000445949 172 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 RNA5SP417-201ENST00000516459 108 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AL133467.4-201ENST00000602953 725 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 AL132780.4-201ENST00000624870 1135 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 AC009145.4-201ENST00000625119 1294 ntBASIC14.69□□□□□ -0.06
ATP2A3Q93084 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATP2A3Q93084 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.69□□□□□ -0.06
ATP2A3Q93084 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 COL6A4P2-202ENST00000504443 2753 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 AC073548.1-201ENST00000624088 1882 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 AL591122.2-201ENST00000624125 1853 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 RN7SKP109-201ENST00000410592 316 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 DPY19L2P5-201ENST00000456300 331 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 CR383656.3-201ENST00000551315 183 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 NDUFB10P1-201ENST00000567319 521 ntBASIC14.68□□□□□ -0.06
ATP2A3Q93084 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.68□□□□□ -0.06
ATP2A3Q93084 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATP2A3Q93084 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATP2A3Q93084 PTPRVP-205ENST00000641549 5067 ntBASIC14.67□□□□□ -0.06
ATP2A3Q93084 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATP2A3Q93084 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ATP2A3Q93084 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATP2A3Q93084 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATP2A3Q93084 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ATP2A3Q93084 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ATP2A3Q93084 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATP2A3Q93084 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms