Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC010141.1-201ENST00000411585 623 ntBASIC12.42□□□□□ -0.42
LRRC28Q86X40 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.42□□□□□ -0.42
LRRC28Q86X40 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC006033.1-201ENST00000440505 426 ntBASIC12.42□□□□□ -0.42
LRRC28Q86X40 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 DUX4L46-201ENST00000566845 751 ntBASIC12.42□□□□□ -0.42
LRRC28Q86X40 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LRRC28Q86X40 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.42□□□□□ -0.42
LRRC28Q86X40 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC004898.1-201ENST00000451057 766 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 AP001258.2-201ENST00000529891 490 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC007663.3-201ENST00000609632 465 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 AL023803.2-201ENST00000620080 638 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC022400.8-201ENST00000623453 3599 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 AC012531.1-201ENST00000562848 2680 ntBASIC12.41□□□□□ -0.42
LRRC28Q86X40 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LRRC28Q86X40 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.41□□□□□ -0.42
LRRC28Q86X40 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LRRC28Q86X40 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
LRRC28Q86X40 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LRRC28Q86X40 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms