Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 MIR1587-201ENST00000583319 53 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC063977.2-201ENST00000601996 421 ntBASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO4Q2I0M5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RSPO4Q2I0M5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 ASLP1-201ENST00000428790 637 ntBASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 RPSAP16-201ENST00000447583 821 ntBASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC010997.1-201ENST00000447646 350 ntBASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 MIR6871-201ENST00000613433 56 ntBASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO4Q2I0M5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO4Q2I0M5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms